STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_5378KEGG: bvi:Bcep1808_3633 aminoglycoside/hydroxyurea antibiotic resistance kinase. (307 aa)    
Predicted Functional Partners:
Sros_1548
Hypothetical protein.
  
     0.475
vgb
Putative hydrolase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid.
  
   
 0.463
Sros_6889
KEGG: elf:LF82_1032 ATP-dependent RNA helicase HrpA.
      
 0.440
Sros_5653
KEGG: pla:Plav_2389 hypothetical protein.
  
     0.436
Sros_3276
Lyase-like protein; KEGG: bbr:BB0423 putative hydrolase.
  
   
 0.427
Sros_3695
KEGG: pla:Plav_2389 hypothetical protein.
  
     0.426
Sros_3946
Hypothetical protein; KEGG: ent:Ent638_0486 GCN5-related N- acetyltransferase.
  
     0.417
Sros_4344
KEGG: bur:Bcep18194_A4942 hypothetical protein.
  
     0.409
Sros_5379
Transcriptional regulators-like protein; KEGG: csa:Csal_0279 transcriptional regulator, MarR family.
       0.408
rimP
Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
     
 0.403
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.