STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_5529KEGG: vei:Veis_0945 binding-protein-dependent transport systems inner membrane component. (305 aa)    
Predicted Functional Partners:
Sros_5530
KEGG: bha:BH3682 sugar ABC transporter (permease).
 0.992
Sros_5528
ABC-type sugar transport system periplasmic component-like protein; KEGG: hypothetical protein.
 
 0.991
Sros_2049
KEGG: bha:BH3682 sugar ABC transporter (permease).
 0.968
Sros_7705
KEGG: bha:BH3682 sugar ABC transporter (permease).
 0.968
Sros_2253
KEGG: bha:BH3682 sugar ABC transporter (permease).
 0.967
Sros_7707
ABC-type sugar transport system periplasmic component-like protein; KEGG: hypothetical protein.
 
 0.965
Sros_2047
ABC-type sugar transport system periplasmic component-like protein; KEGG: hypothetical protein.
 
 0.964
Sros_2048
KEGG: vei:Veis_0945 binding-protein-dependent transport systems inner membrane component.
  
  
 
0.901
Sros_7706
KEGG: cvi:CV_0261 sugar ABC transporter permease protein.
  
  
 
0.901
Sros_3840
KEGG: mlo:mlr2246 permease protein of sugar ABC transporter.
 
 0.860
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.