STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_55533-phytase; KEGG: hch:HCH_03662 3-phytase (myo-inositol- hexaphosphate 3-phosphohydrolase). (424 aa)    
Predicted Functional Partners:
Sros_0228
KEGG: abb:ABBFA_003338 hypothetical protein.
 
   
 0.927
Sros_1046
KEGG: ccs:CCNA_03381 glycerophosphoryl diester phosphodiesterase.
 
   
 0.893
Sros_7923
KEGG: rce:RC1_0289 glycerophosphoryl diester phosphodiesterase.
 
   
 0.839
Sros_7591
Chitinase-like protein; KEGG: sml:Smlt0682 chitinase A.
  
     0.524
Sros_5559
KEGG: sme:SM_b20157 ABC transporter periplasmic substrate-binding protein.
 
     0.468
Sros_0982
KEGG: hypothetical protein.
  
     0.439
Sros_0920
Beta-lactamase; KEGG: mxa:MXAN_2150 beta-lactamase.
  
     0.438
Sros_0821
KEGG: hypothetical protein.
  
     0.404
Sros_2893
Alkaline phosphatase; KEGG: bcm:Bcenmc03_5195 coagulation factor 5/8 type domain-containing protein.
 
   
 0.404
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.