STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_5734KEGG: scl:sce1445 hypothetical protein. (413 aa)    
Predicted Functional Partners:
Sros_3429
KEGG: dac:Daci_1792 flavin reductase domain- containing protein.
 
  
 0.541
Sros_6610
KEGG: gbe:GbCGDNIH1_0668 vanillate demethylase oxygenase subunit.
  
  
 0.506
Sros_5735
Membrane protein-like protein; KEGG: aba:Acid345_1831 ribonuclease BN, putative.
       0.495
Sros_5731
Hypothetical protein; KEGG: scl:sce5395 aminoglycoside phosphotransferase.
 
     0.437
Sros_4434
KEGG: cak:Caul_2304 fatty acid hydroxylase.
  
 
 0.417
Sros_6907
Putative transcriptional regulator, Crp/Fnr family; KEGG: mxa:MXAN_6248 cyclic nucleotide-binding domain protein.
  
     0.417
Sros_1600
ATPase-like protein; KEGG: sus:Acid_5780 serine/threonine protein kinase.
  
     0.410
Sros_0075
KEGG: scl:sce1440 putative terpene cyclase.
  
     0.400
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.