STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_5771KEGG: bmn:BMA10247_A0991 AsnC family transcriptional regulator. (240 aa)    
Predicted Functional Partners:
Sros_7861
KEGG: aav:Aave_2309 AsnC family transcriptional regulator.
  
     0.774
Sros_5688
KEGG: jan:Jann_2008 AsnC family transcriptional regulator.
  
     0.773
Sros_4570
KEGG: bam:Bamb_3888 AsnC family transcriptional regulator.
  
     0.772
Sros_6249
Putative transcriptional regulator, AsnC family; KEGG: bcj:BCAM1597 AsnC family regulatory protein.
  
     0.772
Sros_5843
Putative transcriptional regulator, AsnC family; KEGG: scl:sce5626 leucine responsive regulatory protein.
  
     0.770
Sros_8338
Putative transcriptional regulator, AsnC family; KEGG: saz:Sama_0605 DNA-binding transcriptional regulator AsnC.
  
     0.770
Sros_8543
KEGG: bvi:Bcep1808_5003 AsnC family transcriptional regulator.
  
     0.770
Sros_5772
KEGG: sit:TM1040_2713 extracellular solute-binding protein.
 
     0.631
Sros_5777
Aminopeptidase; KEGG: ses:SARI_00484 aminopeptidase.
   
 
 0.574
Sros_5775
KEGG: pde:Pden_0800 ABC transporter related; Belongs to the ABC transporter superfamily.
  
    0.547
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.