STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_5816KEGG: ade:Adeh_2624 dolichyl-phosphate beta-D- mannosyltransferase. (247 aa)    
Predicted Functional Partners:
lnt
Apolipoprotein N-acyltransferase-like protein; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
    
 0.982
Sros_5474
Dolichyl-phosphate beta-D-mannosyltransferase; KEGG: ank:AnaeK_2710 glycosyl transferase family 2.
  
  
 
0.908
Sros_3832
KEGG: rce:RC1_0231 glycosyl transferase, group 2 family protein.
  
 0.906
Sros_5815
KEGG: mxa:MXAN_5566 FxsA-like protein.
  
    0.636
Sros_5953
KEGG: psa:PST_0623 AMP-dependent synthetase and ligase.
  
   
 0.510
Sros_2696
KEGG: mxa:MXAN_2959 putative long-chain-fatty-acid-- CoA ligase.
  
   
 0.478
Sros_0630
Undecaprenyl-phosphate galactose phosphotransferase; KEGG: acp:A2cp1_1500 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.471
Sros_3318
Sialic acid synthase-like protein; KEGG: aba:Acid345_2841 N-acetylneuraminate synthase.
  
  
 0.454
Sros_6507
KEGG: aba:Acid345_3613 NAD-dependent epimerase/dehydratase.
 
   0.412
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.