STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_5921Conserved hypothetical protein; KEGG: scl:sce0245 sirohydrochlorin cobaltochelatase. (250 aa)    
Predicted Functional Partners:
Sros_7364
KEGG: bpe:BP1055 siroheme synthase.
 
 0.997
Sros_5922
Uroporphyrinogen-III synthase-like protein; KEGG: scl:sce6449 putative transcriptional regulator.
 
  
 0.917
Sros_5923
KEGG: scl:sce8493 nitrite reductase (NAD(P)H).
 
  
 0.747
Sros_6695
KEGG: aba:Acid345_2373 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.707
Sros_5926
KEGG: msl:Msil_3772 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.697
cysH
Phosphoadenosine phosphosulfate; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
 
  
 0.695
cysC
Adenylylsulfate kinase and related kinase-like protein; Catalyzes the synthesis of activated sulfate.
  
  
 0.680
Sros_0550
KEGG: gme:Gmet_3235 uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase.
  
  
 0.679
Sros_5924
KEGG: reu:Reut_B4860 assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.668
Sros_5927
KEGG: bja:blr2806 nitrite extrusion protein.
 
    0.627
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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