Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sros_2832 | Sros_5959 | Diaminohydroxyphosphoribosylaminopyrimidinedeami nase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Hypothetical protein; KEGG: GJ14480 gene product from transcript GJ14480- RA. | 0.520 |
Sros_2832 | Sros_5960 | Diaminohydroxyphosphoribosylaminopyrimidinedeami nase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Molecular chaperone GrpE (heat shock protein)- like protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the re [...] | 0.491 |
Sros_5957 | Sros_5958 | KEGG: kpe:KPK_4258 hypothetical protein. | KEGG: rfr:Rfer_4035 glycoside hydrolase 15-related. | 0.668 |
Sros_5957 | Sros_5959 | KEGG: kpe:KPK_4258 hypothetical protein. | Hypothetical protein; KEGG: GJ14480 gene product from transcript GJ14480- RA. | 0.442 |
Sros_5958 | Sros_5957 | KEGG: rfr:Rfer_4035 glycoside hydrolase 15-related. | KEGG: kpe:KPK_4258 hypothetical protein. | 0.668 |
Sros_5958 | Sros_5959 | KEGG: rfr:Rfer_4035 glycoside hydrolase 15-related. | Hypothetical protein; KEGG: GJ14480 gene product from transcript GJ14480- RA. | 0.508 |
Sros_5959 | Sros_2832 | Hypothetical protein; KEGG: GJ14480 gene product from transcript GJ14480- RA. | Diaminohydroxyphosphoribosylaminopyrimidinedeami nase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.520 |
Sros_5959 | Sros_5957 | Hypothetical protein; KEGG: GJ14480 gene product from transcript GJ14480- RA. | KEGG: kpe:KPK_4258 hypothetical protein. | 0.442 |
Sros_5959 | Sros_5958 | Hypothetical protein; KEGG: GJ14480 gene product from transcript GJ14480- RA. | KEGG: rfr:Rfer_4035 glycoside hydrolase 15-related. | 0.508 |
Sros_5959 | Sros_5960 | Hypothetical protein; KEGG: GJ14480 gene product from transcript GJ14480- RA. | Molecular chaperone GrpE (heat shock protein)- like protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the re [...] | 0.539 |
Sros_5960 | Sros_2832 | Molecular chaperone GrpE (heat shock protein)- like protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the re [...] | Diaminohydroxyphosphoribosylaminopyrimidinedeami nase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.491 |
Sros_5960 | Sros_5959 | Molecular chaperone GrpE (heat shock protein)- like protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the re [...] | Hypothetical protein; KEGG: GJ14480 gene product from transcript GJ14480- RA. | 0.539 |