STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6010KEGG: sek:SSPA2886 hypothetical protein. (226 aa)    
Predicted Functional Partners:
Sros_6009
Uncharacterized protein required for cytochrome oxidase assembly-like protein; KEGG: aeh:Mlg_0300 cytochrome oxidase assembly.
       0.735
Sros_6005
KEGG: mxa:MXAN_6203 dihydrodipicolinate synthase family protein; Belongs to the DapA family.
       0.465
Sros_6006
Oxidoreductase; KEGG: bpd:BURPS668_A0573 oxidoreductase.
       0.465
Sros_6007
Hypothetical protein; KEGG: dat:HRM2_29070 SoxA2.
       0.465
Sros_6008
SoxB2; KEGG: dat:HRM2_29060 SoxB2.
       0.465
Sros_2660
Hypothetical protein; KEGG: sus:Acid_3202 alpha/beta hydrolase fold.
  
     0.404
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.