STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6155Hypothetical protein; KEGG: rme:Rmet_4110 transcriptional regulator, XRE family with cupin sensor domain. (225 aa)    
Predicted Functional Partners:
Sros_7651
Hypothetical protein; KEGG: dac:Daci_0766 von Willebrand factor type A.
  
     0.509
Sros_2558
KEGG: tbd:Tbd_1313 hypothetical protein.
  
     0.482
Sros_1367
Hypothetical protein.
  
     0.450
Sros_5974
KEGG: rme:Rmet_4726 diguanylate cyclase/phosphodiesterase.
  
   
 0.427
Sros_6154
Hypothetical protein.
       0.423
Sros_6868
Hypothetical protein.
   
    0.402
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.