STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6172KEGG: scl:sce4807 hypothetical protein. (417 aa)    
Predicted Functional Partners:
Sros_6173
KEGG: ppw:PputW619_2986 hypothetical protein; Belongs to the UPF0311 family.
 
     0.931
Sros_8153
KEGG: smd:Smed_3990 monooxygenase FAD-binding.
  
     0.596
Sros_6171
Transcriptional regulators-like protein; KEGG: bsu:BSU38450 hypothetical protein.
  
    0.550
Sros_4215
KEGG: scl:sce7879 hypothetical protein.
  
     0.525
Sros_7610
KEGG: sus:Acid_0252 4-hydroxybenzoate 3- monooxygenase.
  
     0.518
Sros_8778
KEGG: scl:sce4973 putative monooxygenase.
  
     0.502
Sros_1039
KEGG: scl:sce0981 putative oxidoreductase.
  
     0.483
Sros_4181
KEGG: bar:GBAA3564 PheA/TfdB family FAD-binding monooxygenase.
  
     0.478
Sros_4156
KEGG: bar:GBAA3564 PheA/TfdB family FAD-binding monooxygenase.
  
     0.475
Sros_2753
KEGG: met:M446_5167 MarR family transcriptional regulator.
  
   0.421
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.