STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6189KEGG: seg:SG3353 hypothetical protein. (385 aa)    
Predicted Functional Partners:
Sros_6188
Hypothetical protein; KEGG: oan:Oant_4445 ADP-ribosylation/crystallin J1.
 
     0.952
Sros_6192
ABC-type sugar transport system periplasmic component-like protein; KEGG: atc:AGR_L_1009 putative sugar transport sugar binding protein.
 
     0.878
Sros_6194
KEGG: smd:Smed_0187 binding-protein-dependent transport systems inner membrane component.
 
     0.844
Sros_6186
Formyl-CoA transferase; KEGG: bpd:BURPS668_A3030 CaiB/BaiF family protein; Belongs to the CoA-transferase III family.
 
     0.815
Sros_6193
KEGG: mes:Meso_4515 binding-protein-dependent transport systems inner membrane component.
 
     0.807
rbsK-2
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
     
 0.786
Sros_6190
KEGG: mlo:mll1744 hypothetical protein.
    
 0.764
Sros_6191
KEGG: psb:Psyr_2921 ADP-ribosylglycohydrolase.
 
    
0.634
Sros_3378
Hypothetical protein.
   
 
 0.629
Sros_6195
KEGG: smd:Smed_4315 periplasmic binding protein/LacI transcriptional regulator.
 
     0.622
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.