STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6276KEGG: pfl:PFL_2261 hypothetical protein. (125 aa)    
Predicted Functional Partners:
pcp
Pyroglutamyl-peptidase I; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.
       0.773
Sros_6275
Metal-dependent hydrolase-like protein; KEGG: mno:Mnod_1343 endonuclease/exonuclease/phosphatase.
       0.682
Sros_0817
KEGG: saz:Sama_0820 putative lipoprotein.
  
     0.438
Sros_8040
KEGG: scl:sce6780 hypothetical protein.
  
     0.426
Sros_6650
Multisubunit Na+/H+ antiporter MnhG subunit- like protein; KEGG: jan:Jann_3689 Na+/H+ antiporter subunit.
   
    0.406
Sros_6274
KEGG: lch:Lcho_2466 hypothetical protein.
       0.401
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.