STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6293KEGG: smd:Smed_2101 ABC transporter related. (242 aa)    
Predicted Functional Partners:
Sros_6296
KEGG: dac:Daci_4389 polar amino acid ABC transporter, inner membrane subunit.
 0.997
Sros_6295
KEGG: baa:BA_1225 binding-protein-dependent transport systems inner membrane component.
 0.996
Sros_6294
KEGG: aav:Aave_3756 extracellular solute-binding protein.
 
 0.990
Sros_5577
KEGG: smd:Smed_5458 polar amino acid ABC transporter, inner membrane subunit.
 
 0.984
Sros_2220
ABC-type amino acid transport system permease component-like protein; KEGG: aav:Aave_3754 polar amino acid ABC transporter, inner membrane subunit.
 0.979
Sros_2221
KEGG: baa:BA_1225 binding-protein-dependent transport systems inner membrane component.
 
 0.979
Sros_4596
KEGG: bxe:Bxe_C1161 polar amino acid ABC transporter inner membrane protein.
 
 0.978
Sros_2222
KEGG: bsu:BSU27440 glutamine ABC transporter (glutamine-binding protein); Belongs to the bacterial solute-binding protein 3 family.
 
 0.969
Sros_2933
KEGG: psp:PSPPH_2346 amino acid ABC transporter, permease protein.
 
 0.963
Sros_2963
KEGG: acr:Acry_0684 polar amino acid ABC transporter, inner membrane subunit.
 
 0.931
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.