STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6518Peroxiredoxin; KEGG: pmy:Pmen_3641 peroxiredoxin; Belongs to the glutathione peroxidase family. (161 aa)    
Predicted Functional Partners:
Sros_1525
KEGG: scl:sce1211 gamma-glutamyltransferase.
    
 0.919
Sros_6881
KEGG: rce:RC1_3131 gamma-glutamyltransferase.
    
 0.919
Sros_9336
Gluconolactonase; KEGG: mlo:mll4328 gluconolactonase.
    0.818
Sros_5492
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.699
Sros_9376
KEGG: ank:AnaeK_4061 thioredoxin reductase.
  
  
 0.618
Sros_0572
KEGG: sse:Ssed_3951 thiol-disulfide isomerase and thioredoxins-like protein.
   
 0.576
Sros_0900
Hypothetical protein; KEGG: Trx-h2; thioredoxin h.
   
 0.576
Sros_2621
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: rpb:RPB_4412 luciferase-like.
      0.550
mshC
Cysteine--tRNA ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily.
      
 0.518
guaA
GMP synthase C terminal domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.515
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.