STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6543Glycosyltransferase probably involved in cell wall biogenesis-like protein; KEGG: hypothetical protein. (514 aa)    
Predicted Functional Partners:
Sros_2851
Hypothetical protein; KEGG: ATGH9B10 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B10); hydrolase, hydrolyzing O-glycosyl compounds.
 
 
 0.946
Sros_3907
Endoglucanase; KEGG: mxa:MXAN_4837 endoglucanase; Belongs to the glycosyl hydrolase family 6.
     
 0.916
Sros_8649
KEGG: glo:Glov_0507 UTP-glucose-1-phosphate uridylyltransferase.
  
 
 0.913
Sros_6769
KEGG: scl:sce0488 Alpha,alpha-trehalose-phosphate synthase (UDP-forming).
  
 
  0.903
Sros_8921
Alpha,alpha-trehalose-phosphate synthase (UDP- forming); KEGG: afw:Anae109_3011 HAD family hydrolase.
  
 
  0.903
Sros_6407
Cellobiohydrolase A (1 4-beta-cellobiosidase A)- like protein; KEGG: mxa:MXAN_4837 endoglucanase; Belongs to the glycosyl hydrolase family 6.
    
 0.901
Sros_0935
Hypothetical protein; KEGG: hch:HCH_02464 cellulase.
     
 0.900
Sros_6890
KEGG: sde:Sde_2272 cellobiohydrolase A (1 4-beta- cellobiosidase A)-like; Belongs to the glycosyl hydrolase family 6.
     
 0.900
Sros_8280
Cellulase; KEGG: scl:sce2234 cellulase.
     
 0.900
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
 
 0.813
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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