STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6611Hypothetical protein. (238 aa)    
Predicted Functional Partners:
Sros_6610
KEGG: gbe:GbCGDNIH1_0668 vanillate demethylase oxygenase subunit.
       0.794
Sros_6609
KEGG: rpc:RPC_1247 hypothetical protein.
       0.785
Sros_6608
KEGG: hypothetical protein.
       0.782
Sros_6607
KEGG: cps:CPS_2708 carbon-nitrogen family hydrolase.
       0.762
Sros_6612
Hypothetical protein.
       0.678
NYC1-2
NYC1; KEGG: NYC1; chlorophyll b reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.653
Sros_6614
KEGG: rpe:RPE_2422 hypothetical protein.
       0.647
Sros_6615
KEGG: dsh:Dshi_1038 Asp/Glu racemase.
       0.624
Sros_6605
KEGG: afw:Anae109_2050 hypothetical protein.
       0.543
Sros_6606
KEGG: mpt:Mpe_A1778 hypothetical protein.
       0.543
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.