STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NYC1-2NYC1; KEGG: NYC1; chlorophyll b reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (254 aa)    
Predicted Functional Partners:
Sros_6612
Hypothetical protein.
       0.797
Sros_6614
KEGG: rpe:RPE_2422 hypothetical protein.
       0.792
Sros_1182
KEGG: reu:Reut_A1577 short-chain dehydrogenase/reductase SDR.
 
    0.774
Sros_4559
KEGG: hha:Hhal_1323 short-chain dehydrogenase/reductase SDR.
 
    0.774
Sros_4522
KEGG: mno:Mnod_3482 short-chain dehydrogenase/reductase SDR.
 
    0.773
Sros_6615
KEGG: dsh:Dshi_1038 Asp/Glu racemase.
       0.773
Sros_1997
KEGG: rpe:RPE_0611 short-chain dehydrogenase/reductase SDR.
 
    0.772
Sros_7642
KEGG: xau:Xaut_2348 short-chain dehydrogenase/reductase SDR.
 
    0.772
Sros_6282
KEGG: pla:Plav_1657 short-chain dehydrogenase/reductase SDR.
 
    0.771
Sros_0768
KEGG: rme:Rmet_5290 short-chain dehydrogenase/reductase SDR.
 
    0.743
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.