STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6623KEGG: swi:Swit_1615 coenzyme F420-dependent N5 N10- methylene tetrahydromethanopterin reductase-like protein. (333 aa)    
Predicted Functional Partners:
Sros_6622
KEGG: nar:Saro_0173 isochorismatase hydrolase.
 
    0.809
Sros_1379
Coenzyme F420-0 gamma-glutamyl ligase; KEGG: bpy:Bphyt_4255 F420-dependent oxidoreductase.
 
  
 0.808
Sros_1380
KEGG: swi:Swit_0414 LPPG:FO 2-phospho-L-lactate transferase.
 
   
 0.794
Sros_6625
KEGG: bur:Bcep18194_B1168 MmgE/PrpD family protein.
  
    0.777
Sros_4162
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: swi:Swit_0724 methylenetetrahydromethanopterin reductase.
  
     0.774
Sros_6624
KEGG: bpy:Bphyt_0616 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
       0.773
Sros_5372
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: aca:ACP_2062 methanesulfonate sulfonatase MsuD.
  
     0.768
Sros_7866
Hypothetical protein.
  
   
 0.768
Sros_4541
Hypothetical protein.
  
   
 0.763
Sros_1970
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: swi:Swit_2098 luciferase family protein.
  
     0.753
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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