STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6667KEGG: rpb:RPB_3096 carbon-monoxide dehydrogenase. (802 aa)    
Predicted Functional Partners:
Sros_6668
KEGG: bxe:Bxe_B0075 putative carbon monoxide dehydrogenase, small chain CutC.
 
 0.998
Sros_2775
KEGG: scl:sce5894 hypothetical protein.
 
 0.989
Sros_1220
KEGG: sus:Acid_2225 2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
 0.988
Sros_6669
Carbon-monoxide dehydrogenase (acceptor); KEGG: rpb:RPB_3113 molybdopterin dehydrogenase, FAD- binding.
 
 
 0.985
Sros_3743
KEGG: mrd:Mrad2831_5461 2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
 0.932
Sros_1218
KEGG: bxe:Bxe_A2144 carbon monoxide dehydrogenase, medium subunit.
 
 0.894
Sros_2774
KEGG: afr:AFE_0777 xanthine dehydrogenase, FAD- binding protein, putative.
 
 0.882
Sros_2845
KEGG: rde:RD1_2976 xanthine dehydrogenase accessory factor, putative.
 
  
 0.816
Sros_6656
KEGG: acr:Acry_0470 carbon monoxide dehydrogenase subunit G.
 
  
 0.802
Sros_5153
KEGG: mxa:MXAN_1751 isoquinoline 1-oxidoreductase, alpha subunit.
 
 
 0.780
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.