STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6739KEGG: avi:Avi_7376 ABC transporter membrane spanning protein (xylose); Belongs to the binding-protein-dependent transport system permease family. (415 aa)    
Predicted Functional Partners:
Sros_6740
KEGG: acr:Acry_1972 ABC transporter related.
 
 0.997
Sros_6741
KEGG: rso:RSp1633 D-xylose-binding periplasmic ABC transporter protein.
 
 0.986
Sros_8731
KEGG: ret:RHE_PC00226 putative sugar ABC transporter, substrate-binding protein.
 
 0.967
Sros_1401
KEGG: cvi:CV_3016 ribose ABC transporter, substrate binding protein.
  
 0.869
Sros_6222
KEGG: bja:blr3201 sugar ABC transporter ATP-binding protein.
  
 0.829
Sros_6738
KEGG: acr:Acry_0116 ROK family protein.
 
     0.829
rbsA
ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.826
Sros_7476
KEGG: cvi:CV_3018 D-ribose transport system ATP- binding protein.
  
 0.825
Sros_8259
KEGG: spe:Spro_1962 ABC transporter-related protein.
  
 0.809
Sros_2416
KEGG: acr:Acry_2781 ABC transporter related.
  
 0.806
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.