STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6762Hypothetical protein. (130 aa)    
Predicted Functional Partners:
Sros_6758
KEGG: bsu:BSU04320 hypothetical protein.
     0.834
Sros_6761
Hypothetical protein.
       0.761
Sros_6760
K+ transport systems NAD-binding component-like protein; KEGG: sat:SYN_02618 potassium transporter peripheral membrane component.
  
     0.757
Sros_6763
Hypothetical protein.
       0.729
Sros_6759
K+ transport systems NAD-binding component-like protein; KEGG: plu:plu4698 potassium transporter peripheral membrane component.
  
     0.727
Sros_1511
Phage shock protein A (IM30) suppresses sigma54- dependent transcription-like protein; KEGG: hypothetical protein.
  
  
 0.712
Sros_2682
KEGG: cti:RALTA_B0605 DNA polymerase III, epsilon subunit + GIY-YIG endonuclease (modular protein).
 
  
 0.655
topA
DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...]
  
  
 0.618
dut
dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
     
 0.611
Sros_8359
Superfamily I DNA and RNA helicase-like protein; KEGG: gsu:GSU3411 ATP-dependent DNA helicase PcrA, putative.
  
  
 0.569
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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