STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6818KEGG: pla:Plav_0977 putative flavin-binding monooxygenase. (479 aa)    
Predicted Functional Partners:
Sros_3992
KEGG: pla:Plav_1665 alpha/beta hydrolase domain- containing protein.
  
 0.935
Sros_7511
KEGG: pla:Plav_1665 alpha/beta hydrolase domain- containing protein.
  
 0.931
Sros_5453
KEGG: rle:RL3551 putative exported lipase/esterase.
  
 0.930
Sros_3441
KEGG: dol:Dole_1618 alpha/beta hydrolase domain- containing protein.
  
 0.926
atpA
H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
   
   0.766
Sros_3887
Saccharopine dehydrogenase (NAD(+), L-glutamate- forming); KEGG: hch:HCH_05374 hypothetical protein.
  
   
 0.708
Sros_2609
Hypothetical protein; KEGG: GH13373 gene product from transcript GH13373- RA.
    
 
 0.638
Protein
Protein; KEGG: predicted protein; K02183 calmodulin.
    
 
 0.638
Sros_1041
KEGG: reu:Reut_B5462 esterase/lipase/thioesterase.
  
 0.619
Sros_6817
KEGG: sfu:Sfum_1210 protein of unknown function DUF34.
   
   0.588
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.