STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6821KEGG: aba:Acid345_3833 hypothetical protein. (273 aa)    
Predicted Functional Partners:
Sros_6820
Peptidase M20; KEGG: aba:Acid345_0237 peptidase M20.
     0.954
menC-3
O-succinylbenzoic acid synthetase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
     0.931
menC-2
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
     0.805
Sros_6819
KEGG: DPEP1; dipeptidase 1 (renal); K01273 membrane dipeptidase.
 
     0.805
Sros_5703
Peptidase M20; KEGG: aba:Acid345_0237 peptidase M20.
     0.802
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
     0.799
Sros_6462
KEGG: bsu:BSU30780 O-succinylbenzoate-CoA synthase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
     0.779
Sros_5712
Putative transcriptional regulator, PucR family; KEGG: bha:BH1072 hypothetical protein.
 
     0.717
Sros_5711
ABC-type dipeptide transport system periplasmic component-like protein; KEGG: eca:ECA0448 putative ABC transporter extracellular solute binding protein.
     0.596
Sros_6818
KEGG: pla:Plav_0977 putative flavin-binding monooxygenase.
       0.561
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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