STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6833KEGG: ccs:CCNA_02400 transporter, major facilitator superfamily. (423 aa)    
Predicted Functional Partners:
Sros_6842
Non-ribosomal peptide synthetase modules and related protein-like protein; KEGG: mxa:MXAN_4000 non-ribosomal peptide synthetase.
  
  
 0.483
Sros_6841
KEGG: bvi:Bcep1808_1578 MbtH domain-containing protein.
       0.461
Sros_6839
KEGG: swi:Swit_0843 acyl-CoA synthetase.
  
    0.457
Sros_6834
KEGG: scl:sce8257 non-ribosomal peptide synthetase.
       0.454
Sros_6835
KEGG: ppf:Pput_1675 amino acid adenylation domain- containing protein.
       0.454
Sros_6836
KEGG: mxa:MXAN_3635 non-ribosomal peptide synthase/polyketide synthase.
       0.454
Sros_6837
Hypothetical protein; KEGG: bmn:BMA10247_A0621 putative peptide synthetase.
       0.454
Sros_6838
Non-ribosomal peptide synthetase modules and related protein-like protein; KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase.
       0.454
Sros_6840
Hypothetical protein.
       0.454
Sros_5559
KEGG: sme:SM_b20157 ABC transporter periplasmic substrate-binding protein.
 
  
 0.443
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.