STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6848Hypothetical protein; KEGG: pde:Pden_5008 copper resistance protein CopC. (343 aa)    
Predicted Functional Partners:
Sros_6847
Conserved hypothetical protein of Cu resistance protein CopC-like protein; KEGG: bra:BRADO4155 copper resistance protein.
 
  
 0.950
Sros_3433
Conserved hypothetical protein; KEGG: pla:Plav_0807 nuclear export factor GLE1.
  
  
 0.848
Sros_2619
KEGG: cak:Caul_0821 hypothetical protein.
  
     0.660
Sros_2571
Conserved hypothetical protein containing Cu resistance protein-like domain; KEGG: bja:bll4878 copper export protein.
 
  
 0.638
Sros_8106
SLT domain protein-like protein; KEGG: bsu:BSU12680 hypothetical protein; Belongs to the WXG100 family.
  
     0.614
Sros_7702
Hypothetical protein; KEGG: ajs:Ajs_2057 superoxide dismutase, copper/zinc binding.
  
     0.601
Sros_8529
Hypothetical protein; KEGG: Lor, RGD1559993_predicted; loricrin; K10385 loricrin.
  
     0.593
Sros_4979
Hypothetical protein; KEGG: bra:BRADO4155 copper resistance protein.
 
  
 0.579
Sros_7450
KEGG: ccs:CCNA_03539 hypothetical protein.
  
     0.541
Sros_6363
Hypothetical protein.
  
     0.532
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.