STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6920KEGG: reu:Reut_A2011 hypothetical protein. (293 aa)    
Predicted Functional Partners:
Sros_6921
KEGG: sfu:Sfum_1091 WD-40 repeat protein.
 
     0.946
Sros_8021
Hypothetical protein; KEGG: tgr:Tgr7_0547 peroxiredoxin-like protein.
  
     0.698
Sros_8924
Trehalose-6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.664
Sros_6918
KEGG: scl:sce3803 putative ATP/GTP-binding protein.
 
     0.606
Sros_5964
KEGG: mca:MCA1193 hypothetical protein.
  
     0.605
Sros_8980
Adenylate cyclase family 3 (some protein contain HAMP domain)-like protein; KEGG: mxa:MXAN_3956 putative adenylate cyclase.
 
     0.574
Sros_6919
Hypothetical protein.
       0.554
Sros_1526
KEGG: scl:sce0722 hypothetical protein.
  
     0.546
Sros_5963
KEGG: scl:sce3622 hypothetical protein.
  
    0.542
nhaA-2
Putative sodium/proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
  
    0.530
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.