STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7030Hypothetical protein. (260 aa)    
Predicted Functional Partners:
Sros_4029
ATPase-like protein; KEGG: afw:Anae109_3347 transcriptional activator domain-containing protein.
  
 
   0.653
Sros_8891
KEGG: rle:pRL100455 hypothetical protein.
  
    0.611
Sros_6884
KEGG: noc:Noc_2546 hypothetical protein.
  
     0.559
Sros_6553
KEGG: mrd:Mrad2831_3019 hypothetical protein.
  
     0.553
Sros_8040
KEGG: scl:sce6780 hypothetical protein.
  
     0.549
Sros_9251
Hypothetical protein; KEGG: GI17572 gene product from transcript GI17572- RA.
  
     0.543
Sros_8672
ADP-ribose pyrophosphatase-like protein; KEGG: acp:A2cp1_1251 NUDIX hydrolase.
 
     0.527
Sros_5062
KEGG: hypothetical protein.
  
    0.525
Sros_3283
KEGG: pen:PSEEN3364 hypothetical protein.
  
     0.514
Sros_8674
Hypothetical protein.
  
     0.501
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.