STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7392KEGG: ppw:PputW619_2209 PucR family transcriptional regulator. (362 aa)    
Predicted Functional Partners:
Sros_7393
Hypothetical protein; KEGG: sus:Acid_1882 ABC-2 type transporter.
 
     0.918
Sros_7394
KEGG: bar:GBAA3653 ABC transporter ATP-binding protein.
 
     0.823
Sros_3385
Hypothetical protein; KEGG: Muc19; mucin 19.
  
     0.659
Sros_5128
KEGG: mxa:MXAN_4556 hypothetical protein.
  
    0.524
Sros_7824
Hypothetical protein; KEGG: afw:Anae109_4225 MerR family transcriptional regulator.
  
     0.472
Sros_8024
KEGG: mxa:MXAN_7119 MATE efflux family protein.
  
     0.472
Sros_0797
Choline kinase involved in LPS biosynthesis- like protein; KEGG: mlo:mll5367 hypothetical protein.
  
     0.470
Sros_8040
KEGG: scl:sce6780 hypothetical protein.
  
     0.461
Sros_7395
Patatin; KEGG: rme:Rmet_4898 patatin.
       0.458
Sros_5820
KEGG: sme:SM_b20971 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor.
  
     0.443
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.