STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7585KEGG: bam:Bamb_5828 beta-lactamase domain- containing protein. (266 aa)    
Predicted Functional Partners:
Sros_7584
KEGG: pmy:Pmen_4335 rhodanese domain-containing protein.
  
 
 0.802
Sros_7586
KEGG: reu:Reut_B5508 hypothetical protein.
  
   0.785
Sros_7583
KEGG: mxa:MXAN_4355 YceI-like family protein; Belongs to the UPF0312 family.
       0.773
Sros_7587
KEGG: dsh:Dshi_4186 ABC transporter related.
       0.773
Sros_7588
KEGG: dsh:Dshi_4187 binding-protein-dependent transport systems inner membrane component.
       0.773
Sros_7589
KEGG: rsq:Rsph17025_1925 binding-protein-dependent transport systems inner membrane component.
       0.773
Sros_7590
Hypothetical protein; KEGG: avi:Avi_7163 taurine ABC transporter periplasmic binding protein.
       0.773
Sros_7581
KEGG: ret:RHE_CH00498 putative multidrug transport protein.
       0.623
Sros_7582
KEGG: sse:Ssed_1759 GntR family transcriptional regulator.
       0.623
Sros_7591
Chitinase-like protein; KEGG: sml:Smlt0682 chitinase A.
  
    0.403
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.