STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7596KEGG: pae:PA1472 hypothetical protein. (174 aa)    
Predicted Functional Partners:
Sros_8645
KEGG: pla:Plav_0679 GCN5-related N- acetyltransferase.
  
     0.585
Sros_5433
KEGG: bcm:Bcenmc03_5745 GCN5-related N- acetyltransferase.
  
     0.543
Sros_7597
KEGG: mca:MCA2764 putative lipoprotein.
       0.542
Sros_6345
KEGG: pmy:Pmen_1643 GCN5-related N- acetyltransferase.
  
     0.478
Sros_1771
KEGG: mxa:MXAN_1633 acetyltransferase, GNAT family.
  
     0.423
Sros_3463
L-lysine 6-monooxygenase (NADPH); KEGG: bur:Bcep18194_A4789 lysine/ornithine N- monooxygenase.
  
  
 0.420
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.