STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7611KEGG: scl:sce2340 ArsR family transcriptional regulator. (185 aa)    
Predicted Functional Partners:
Sros_7612
Hypothetical protein; KEGG: rlt:Rleg2_2068 activator of HSP90 ATPase 1 family protein.
 
    0.930
Sros_4045
KEGG: scl:sce2341 hypothetical protein.
 
    0.775
Sros_1184
KEGG: dac:Daci_2439 hypothetical protein.
  
     0.558
Sros_5476
KEGG: pmy:Pmen_4204 hypothetical protein.
  
     0.555
Sros_7608
KEGG: bja:blr0928 protocatechuate 3,4-dioxygenase alpha chain.
       0.520
Sros_7609
KEGG: pol:Bpro_0627 protocatechuate 3,4- dioxygenase, beta subunit.
       0.520
Sros_7610
KEGG: sus:Acid_0252 4-hydroxybenzoate 3- monooxygenase.
       0.520
Sros_3497
Hypothetical protein; KEGG: bsu:BSU15300 bacillopeptidase F.
  
     0.505
Sros_7256
KEGG: pol:Bpro_0146 hypothetical protein.
  
     0.496
Sros_6485
KEGG: rfr:Rfer_1113 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 3 family.
  
     0.459
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.