STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7618KEGG: bja:bll0083 hypothetical protein. (122 aa)    
Predicted Functional Partners:
Sros_7619
KEGG: mlo:mll2196 short chain oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.773
Sros_7437
KEGG: mag:amb3422 hypothetical protein.
  
     0.565
Sros_7620
Putative transcriptional regulator, XRE family; KEGG: mlo:mll1636 hypothetical protein.
       0.548
Sros_3755
Hypothetical protein; KEGG: eta:ETA_28190 clavaminate synthase 1.
  
     0.509
Sros_2467
KEGG: bvi:Bcep1808_5016 GCN5-related N- acetyltransferase.
  
     0.457
Sros_5731
Hypothetical protein; KEGG: scl:sce5395 aminoglycoside phosphotransferase.
  
     0.444
Sros_3243
Hypothetical protein.
  
     0.428
Sros_2704
KEGG: hypothetical protein LOC100086963.
  
     0.408
Sros_6278
KEGG: hypothetical protein.
  
     0.407
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.