STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7653Hypothetical protein. (123 aa)    
Predicted Functional Partners:
Sros_7654
KEGG: mmr:Mmar10_1755 cellulose biosynthesis protein CelD.
       0.796
Sros_7658
Membrane protein involved in the export of O- antigen and teichoic acid-like protein; KEGG: rle:pRL110396 putative transmembrane protein.
       0.623
Sros_7656
KEGG: mno:Mnod_6856 glycosyl transferase family 2.
       0.606
Sros_7655
KEGG: rle:pRL110390 putative glycosyltransferase.
       0.526
Sros_7657
KEGG: cti:RALTA_A2167 putative polysaccharide deacetylase.
       0.484
Sros_7652
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: ade:Adeh_1747 sigma-24 (FecI-like); Belongs to the sigma-70 factor family. ECF subfamily.
       0.473
Sros_7659
KEGG: scl:sce7867 cytochrome P450 CYP124E1.
       0.473
Sros_7661
KEGG: ccs:CCNA_02361 polysaccharide biosynthesis protein CelD.
       0.405
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.