STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7700KEGG: bha:BH3701 beta-galactosidase. (667 aa)    
Predicted Functional Partners:
Sros_6587
Hypothetical protein; KEGG: aca:ACP_0066 alpha-galactosidase.
 
  
 0.957
Sros_7453
KEGG: xcv:XCV3214 beta-galactosidase.
 
  
  0.920
Sros_1503
KEGG: mpo:Mpop_2993 aldose 1-epimerase.
  
 
 0.912
Sros_3303
KEGG: eum:ECUMN_4406 putative aldose-1-epimerase.
  
 
 0.912
Sros_1287
KEGG: bha:BH3701 beta-galactosidase.
  
  
 
0.911
Sros_3535
KEGG: scl:sce7608 hypothetical protein; Belongs to the glycosyl hydrolase 35 family.
    
  0.902
Sros_7698
KEGG: vei:Veis_2458 glycine dehydrogenase subunit 2.
       0.795
Sros_7699
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
       0.795
Sros_7697
KEGG: asa:ASA_2413 ATP-NAD/AcoX kinase.
       0.792
Sros_7696
KEGG: vei:Veis_2457 short-chain dehydrogenase/reductase SDR.
  
   0.777
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.