STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7744KEGG: bbt:BBta_3721 ArsR family transcriptional regulator. (322 aa)    
Predicted Functional Partners:
Sros_7743
KEGG: ade:Adeh_4255 major facilitator transporter.
 
     0.690
Sros_8843
Hypothetical protein; KEGG: geo:Geob_0328 glyoxalase/bleomycin resistance protein/dioxygenase.
 
    0.520
Sros_5388
KEGG: scl:sce6114 hypothetical protein.
  
     0.461
Sros_8299
KEGG: jan:Jann_2411 hypothetical protein.
  
     0.452
Sros_4755
Signal transduction histidine kinase-like protein; KEGG: mlo:mll7952 two-component system, sensor protein.
  
     0.438
Sros_6243
KEGG: sus:Acid_5959 hypothetical protein.
  
     0.418
Sros_1132
Hypothetical protein; KEGG: met:M446_2858 copper ABC transporter, permease protein NosY.
  
     0.412
Sros_0447
KEGG: mmr:Mmar10_0702 TetR family transcriptional regulator.
  
     0.408
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.