STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7767Hypothetical protein. (253 aa)    
Predicted Functional Partners:
Sros_3729
KEGG: afw:Anae109_0861 4Fe-4S ferredoxin iron- sulfur binding domain-containing protein.
   
    0.739
leuS
KEGG: glo:Glov_2116 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.580
Sros_6065
Hypothetical protein.
  
 
 0.555
Sros_7360
KEGG: rso:RSc0422 single-strand DNA-binding protein.
  
 
 0.555
Sros_9356
KEGG: bmn:BMA10247_2957 single-stranded DNA-binding protein.
  
 
 0.555
Sros_2039
KEGG: baa:BA_2234 helix-turn-helix family DUF118.
   
    0.525
Sros_4313
Response regulator receiver protein; KEGG: sus:Acid_1756 transcriptional regulator, TrmB.
   
    0.525
Sros_5215
Hypothetical protein; KEGG: sus:Acid_1756 transcriptional regulator, TrmB.
   
    0.525
Sros_5791
KEGG: sus:Acid_1756 transcriptional regulator, TrmB.
   
    0.525
pheT
Phenylalanine--tRNA ligase; KEGG: ank:AnaeK_1907 phenylalanyl-tRNA synthetase, beta subunit.
  
  
 0.525
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.