STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7957KEGG: cak:Caul_2456 pyridoxamine 5'-phosphate oxidase-related FMN-binding. (131 aa)    
Predicted Functional Partners:
Sros_5600
Hypothetical protein.
  
  
 
0.911
Sros_3241
Heme oxygenase; KEGG: MGC80397 protein; K00510 heme oxygenase.
     
  0.900
Sros_7956
KEGG: rle:pRL110536 haloalkane dehalogenase.
       0.689
Sros_4541
Hypothetical protein.
  
     0.598
Sros_8570
Hypothetical protein.
  
     0.578
Sros_7958
KEGG: scl:sce8968 nucleotide-diphosphate-sugar epimerase.
  
    0.562
Sros_3380
KEGG: mch:Mchl_2413 CsbD family protein; Belongs to the UPF0337 (CsbD) family.
 
    0.547
Sros_5424
KEGG: hypothetical protein.
  
     0.535
Sros_2643
KEGG: aba:Acid345_0055 hypothetical protein.
  
    0.518
Sros_5802
KEGG: mch:Mchl_1435 putative dehydrogenase protein.
  
     0.485
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.