STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7988KEGG: rsh:Rsph17029_3058 ABC transporter related. (260 aa)    
Predicted Functional Partners:
Sros_7986
KEGG: sme:SMa1745 ABC transporter, permease, Fe3+- siderophore transport system; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.981
Sros_7987
KEGG: pau:PA14_10140 ferric enterobactin transport protein FepG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.962
Sros_7985
KEGG: bar:GBAA2255 substrate-binding family protein, putative.
 
  
 0.935
Sros_0851
KEGG: oan:Oant_4083 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.917
Sros_2523
KEGG: bha:BH1586 ferric ion ABC transpoter (permease); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.906
Sros_3467
KEGG: oan:Oant_2826 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.906
Sros_4231
KEGG: pfl:PFL_3624 ferric vibriobactin ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.906
Sros_3070
KEGG: cvi:CV_2236 iron-enterobactin transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.903
Sros_5059
KEGG: pfo:Pfl01_0591 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.903
Sros_5109
KEGG: kpn:KPN_00608 iron-enterobactin transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.901
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.