STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbiDConserved hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor. (222 aa)    
Predicted Functional Partners:
Sros_1380
KEGG: swi:Swit_0414 LPPG:FO 2-phospho-L-lactate transferase.
 
  
 0.989
Sros_1379
Coenzyme F420-0 gamma-glutamyl ligase; KEGG: bpy:Bphyt_4255 F420-dependent oxidoreductase.
   
 0.934
Sros_1376
KEGG: swi:Swit_0717 FO synthase.
 
   
 0.832
Sros_0833
Hypothetical protein.
 
   
 0.719
Sros_7866
Hypothetical protein.
 
   
 0.716
Sros_4541
Hypothetical protein.
 
   
 0.713
Sros_4162
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: swi:Swit_0724 methylenetetrahydromethanopterin reductase.
 
   
 0.696
Sros_5424
KEGG: hypothetical protein.
 
   
 0.676
Sros_5802
KEGG: mch:Mchl_1435 putative dehydrogenase protein.
 
   
 0.640
Sros_6623
KEGG: swi:Swit_1615 coenzyme F420-dependent N5 N10- methylene tetrahydromethanopterin reductase-like protein.
 
   
 0.633
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.