STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8103Cell wall-associated hydrolase (invasion- associated protein)-like protein; KEGG: Clan CA, family C40, NlpC/P60 superfamily cysteine peptidase; Belongs to the WXG100 family. (393 aa)    
Predicted Functional Partners:
Sros_2622
Cell wall-associated hydrolase (invasion- associated protein)-like protein; KEGG: NlpC/P60-like cell-wall peptidase.
  
     0.720
Sros_0401
KEGG: pzu:PHZ_c2079 sensor histidine kinase/response regulator.
  
 
 0.402
Sros_1943
KEGG: afw:Anae109_0540 GAF sensor hybrid histidine kinase.
  
 
 0.402
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.