STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8110Cysteine desulfurase; KEGG: rru:Rru_A1068 aminotransferase, class V. (387 aa)    
Predicted Functional Partners:
Sros_5982
KEGG: bha:BH3468 nitrogen fixation protein.
  
 0.993
Sros_2668
KEGG: ade:Adeh_4046 SirA-like; Belongs to the sulfur carrier protein TusA family.
   
 0.987
Sros_8385
KEGG: hch:HCH_02851 molybdopterin/thiamine biosynthesis family protein.
 
 
 0.980
thiI
Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
  
 0.963
Sros_7064
KEGG: scl:sce6912 thiosulfate sulfurtransferase.
  
 0.916
Sros_0902
KEGG: cja:CJA_2345 rhodanese-like domain protein.
  
 0.915
Sros_2669
KEGG: gur:Gura_1493 aminotransferase, class V.
  
  
 
0.915
Sros_7584
KEGG: pmy:Pmen_4335 rhodanese domain-containing protein.
  
 0.915
Sros_8687
Cysteine desulfurase; KEGG: afw:Anae109_1098 aminotransferase class V.
  
  
 
0.913
Sros_6522
KEGG: mmr:Mmar10_1630 hypothetical protein.
   
 
 0.878
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.