STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8129KEGG: pen:PSEEN4936 iron ABC transporter, permease protein. (502 aa)    
Predicted Functional Partners:
Sros_8130
KEGG: mxa:MXAN_0770 iron ABC transporter, periplasmic iron-binding protein.
 
 0.998
Sros_8128
KEGG: bxe:Bxe_B1837 ABC Fe+3 transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
 0.993
Sros_5559
KEGG: sme:SM_b20157 ABC transporter periplasmic substrate-binding protein.
  
 
 0.937
Sros_5569
KEGG: smd:Smed_3963 binding-protein-dependent transport systems inner membrane component.
  
  
 
0.915
Sros_5570
KEGG: smd:Smed_3962 ABC transporter related; Belongs to the ABC transporter superfamily.
  
 0.835
Sros_8131
Hypothetical protein; KEGG: GK24884 gene product from transcript GK24884- RA.
       0.757
Sros_8132
Hypothetical protein.
       0.757
Sros_7381
KEGG: acr:Acry_0984 extracellular solute-binding protein.
  
  
 0.680
Sros_8437
KEGG: rru:Rru_A0500 extracellular solute-binding protein.
  
  
 0.680
Sros_7384
KEGG: acr:Acry_0981 ABC transporter related; Belongs to the ABC transporter superfamily.
  
 0.586
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.