STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8131Hypothetical protein; KEGG: GK24884 gene product from transcript GK24884- RA. (506 aa)    
Predicted Functional Partners:
Sros_8132
Hypothetical protein.
       0.773
Sros_8128
KEGG: bxe:Bxe_B1837 ABC Fe+3 transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
       0.757
Sros_8129
KEGG: pen:PSEEN4936 iron ABC transporter, permease protein.
       0.757
Sros_8130
KEGG: mxa:MXAN_0770 iron ABC transporter, periplasmic iron-binding protein.
       0.757
Sros_8133
KEGG: mgm:Mmc1_3268 glycosyl transferase, family 2.
       0.510
Sros_8127
KEGG: scl:sce1523 glycogen debranching protein.
       0.457
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.