STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8153KEGG: smd:Smed_3990 monooxygenase FAD-binding. (424 aa)    
Predicted Functional Partners:
Sros_4156
KEGG: bar:GBAA3564 PheA/TfdB family FAD-binding monooxygenase.
  
     0.630
Sros_8152
Putative transcriptional regulator, TetR family; KEGG: nma:NMA1971 transcriptional regulator.
 
     0.628
Sros_4181
KEGG: bar:GBAA3564 PheA/TfdB family FAD-binding monooxygenase.
  
     0.617
Sros_4138
Monooxygenase, FAD-binding protein; KEGG: bur:Bcep18194_A4891 monooxygenase, FAD- binding.
  
     0.606
Sros_6172
KEGG: scl:sce4807 hypothetical protein.
  
     0.596
Sros_7785
KEGG: mxa:MXAN_3398 FAD-dependent oxidoreductase.
  
     0.586
Sros_5796
KEGG: scl:sce4973 putative monooxygenase.
  
     0.576
Sros_8778
KEGG: scl:sce4973 putative monooxygenase.
  
     0.535
Sros_4474
KEGG: ara:Arad_4080 salicylate hydroxylase protein.
  
     0.532
Sros_4164
KEGG: bbt:BBta_2587 putative monoxygenase.
  
     0.531
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.