STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8207KEGG: mes:Meso_0701 transcriptional regulator, TetR family. (240 aa)    
Predicted Functional Partners:
Sros_2321
KEGG: ank:AnaeK_0030 NAD-dependent epimerase/dehydratase.
 
     0.600
Sros_8208
KEGG: pag:PLES_32661 putative major facilitator superfamily (MFS) transporter.
       0.548
Sros_8209
KEGG: ara:Arad_2792 hypothetical protein.
       0.548
Sros_6745
Hypothetical protein; KEGG: bmn:BMA10247_A0596 ricin-type beta-trefoil lectin domain/galactose oxidase domain-containing protein.
  
     0.452
Sros_0201
Hypothetical protein; KEGG: reh:H16_A2625 ABC-type transporter, permease component: HAAT family.
  
     0.403
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.