STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8227KEGG: hypothetical protein. (261 aa)    
Predicted Functional Partners:
Sros_3544
KEGG: bav:BAV1607 phage excisionase.
  
     0.550
Sros_8055
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: bsu:BSU18350 penicillin-binding protein (D- alanyl-D-alanine carboxypeptidase).
     
 0.532
Sros_9179
D-alanyl-D-alanine carboxypeptidase (penicillin- binding protein 4)-like protein; KEGG: acp:A2cp1_3950 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
     
 0.532
Sros_3420
KEGG: nar:Saro_1471 TetR family transcriptional regulator.
  
     0.522
Sros_7279
Peptidoglycan glycosyltransferase; KEGG: sat:SYN_00551 cell elongation specific D,D- transpeptidase.
     
 0.519
Sros_1019
Hypothetical protein.
  
     0.495
Sros_3421
Putative transcriptional regulator, TetR family; KEGG: bmj:BMULJ_04575 transcriptional regulatory protein.
  
     0.482
Sros_3413
Spermidine synthase-like protein; KEGG: sus:Acid_3582 hypothetical protein.
  
    0.465
Sros_8226
KEGG: bsu:BSU12220 hypothetical protein; Belongs to the UDP-glycosyltransferase family.
 
     0.432
Sros_3300
KEGG: tmz:Tmz1t_0590 protein of unknown function DUF1555.
  
     0.430
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.