STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8233KEGG: hypothetical protein. (1208 aa)    
Predicted Functional Partners:
Sros_8236
ABC-type sugar transport system periplasmic component-like protein; KEGG: rlt:Rleg2_5608 extracellular solute-binding protein family 1.
 
     0.865
Sros_0430
Putative L-arabinose isomerase protein; Catalyzes the conversion of L-arabinose to L-ribulose.
 
     0.833
Sros_8234
KEGG: bsu:BSU30290 maltose transport protein.
 
     0.768
Sros_8235
KEGG: mlo:mlr7001 ABC transporter, permease protein.
 
     0.748
Sros_8237
alpha-L-rhamnosidase; KEGG: ccs:CCNA_01029 alpha-L-rhamnosidase.
 
     0.687
Sros_4414
Hypothetical protein; KEGG: bph:Bphy_7397 TAP domain-containing protein.
  
     0.623
Sros_7143
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: pde:Pden_1120 luciferase family protein.
  
     0.598
Sros_8238
KEGG: vei:Veis_2020 carbohydrate kinase, FGGY.
 
   
 0.596
Sros_0305
Hypothetical protein; KEGG: GA18158 gene product from transcript GA18158- RA; K01290 carboxypeptidase A.
  
     0.581
Sros_2487
KEGG: mes:Meso_3022 hypothetical protein.
  
     0.578
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.