STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8239KEGG: sml:Smlt0963 putative phosphoglycerate mutase. (194 aa)    
Predicted Functional Partners:
Sros_8238
KEGG: vei:Veis_2020 carbohydrate kinase, FGGY.
 
  
 0.900
Sros_8240
KEGG: ara:Arad_7468 transcriptional regulator protein.
  
    0.683
Sros_2651
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase-like protein; KEGG: bvi:Bcep1808_2531 adenosylcobinamide kinase.
 
  
 0.657
cobS
Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
  
 0.622
cobQ
Adenosylcobyric acid synthase (glutamine- hydrolyzing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.617
Sros_5595
Precorrin-3B methylase-like protein; KEGG: bac:BamMC406_1589 precorrin-3B C17- methyltransferase.
  
  
 0.607
Sros_8241
KEGG: acr:Acry_2572 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
 
    0.544
Sros_8236
ABC-type sugar transport system periplasmic component-like protein; KEGG: rlt:Rleg2_5608 extracellular solute-binding protein family 1.
       0.526
Sros_8237
alpha-L-rhamnosidase; KEGG: ccs:CCNA_01029 alpha-L-rhamnosidase.
       0.526
Sros_5886
KEGG: rlt:Rleg2_3175 phosphoglycerate mutase.
  
     0.509
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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