STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8257KEGG: mlo:mll1012 periplasmic ribose-binding protein. (353 aa)    
Predicted Functional Partners:
Sros_8258
KEGG: bsu:BSU35950 ribose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
 
 0.985
Sros_8259
KEGG: spe:Spro_1962 ABC transporter-related protein.
 
 0.984
Sros_1400
KEGG: cvi:CV_3017 D-ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
Sros_2414
KEGG: mlo:mll4201 ribose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
 
 0.968
Sros_2415
KEGG: pna:Pnap_4052 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.968
Sros_2417
KEGG: acr:Acry_1070 ABC-type sugar transport system periplasmic component-like protein.
  
  
  0.960
Sros_8211
KEGG: bph:Bphy_4300 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.956
Sros_2416
KEGG: acr:Acry_2781 ABC transporter related.
 
 0.953
rbsA
ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.951
Sros_0401
KEGG: pzu:PHZ_c2079 sensor histidine kinase/response regulator.
   
 
 0.944
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.